
Deep Learning
5 days ago
Position Summary
To accelerate the adoption of clinical sequencing, Illumina is recruiting a world-class Machine Learning Scientist and Software Engineer to work on the development of novel deep learning algorithms and production-ready software for deciphering the effects of genetic variants in the human genome.
Major aims include modeling the effects of genetic variants on gene function, transcriptional regulation, and diagnosis of pathogenic variants in patients with cancer or rare genetic diseases. A key objective is to develop robust, scalable software implementations of research results and publish these findings in peer-reviewed journals. This will improve the accuracy, throughput, and reproducibility of genome interpretation, thereby removing barriers to the clinical adoption of whole genome sequencing. In addition to strong analytical and software development skills, this position will require initiative, autonomy, and scientific collaboration.
Responsibilities
Contribute to the development of deep learning algorithms for interpreting human genetic data, supporting efforts to identify pathogenic genetic variants using information from clinical phenotypes, protein structures, and genomic data.
Implement, test, and document software modules under the guidance of senior team members, with a focus on reliability, scalability, and efficiency.
Support collaborations with internal and external partners by preparing datasets, running analyses, and contributing to project deliverables.
Assist in preparing research results for internal reports, presentations, and publications, and contribute to integrating methods into software products for the genetics community.
Note: Listed responsibilities are an essential, but not exhaustive, list of usual duties. Changes may occur due to business needs.
Preferred Requirements
Knowledge in deep learning, statistics, bioinformatics, and/or genomics.
Knowledge in full-stack software development and deployment of scientific software.
Familiarity with software development best practices, including version control (e.g., Git), testing frameworks, and CI/CD.
Strong communication skills.
Ability to work in a fast-paced, competitive environment, with a track record of delivering complex scientific projects and publications under tight timelines.
Preferred Experience/Education
BS or MS in computer science, bioinformatics, computational biology, or a related field.
Illumina is an equal opportunity employer committed to providing employment opportunities regardless of sex, race, creed, color, gender, religion, marital status, domestic partner status, age, national origin or ancestry, physical or mental disability, medical condition, sexual orientation, pregnancy, military or veteran status, citizenship status or genetic information. We conduct background checks on applicants whom a conditional offer has been made. The background check process and any decisions will be made in accordance with applicable laws. Illumina prohibits the use of generative AI in the application and interview process. If you require accommodation to complete the application or interview process, please contact
To learn more, visit: The position will be posted until a final candidate is selected or the requisition has a sufficient number of qualified applicants. This role is not eligible for visa sponsorship.
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